|
|
Convert map with mapman
From $1
Table of contents- 1. Storyboard
Storyboard - ftp xray.bmc.uu.se
login as anonymous with your email as password
cd into pub/gerard
Get the rave suite of programs for eg since I have a mac I get rave_osx.tar.gz from the osx directory
Then chmod +x the executables you just downloaded - To convert map from cns to ccp4 format you would run the following
osx_mapman - AT the MAPMAN> prompt read in the map into a variable called slot1
re slot1 mapfilename_cns.map
When mapman asks you which format - say X-PLOR for the cns format which is the input map , that you are storing in slot1
X-PLOR - Then write out the map
wr slot1
When mapman asks for filename , enter what you want the file to be called
mapfilename_cns_convertedccp4.map
Then when it asks for format enter CCP4
CCP4 - If
all goes well you will have the converted map. Also some maps tend to
be big and may fail with a MAPSIZE error. Then you need to set the
environment variable as follows
setenv MAPSIZE 1111111 ( for cshrc e.g)
or
export MAPSIZE=11111111 ( for bashrc eg)
Set these in the unix/linux/osx shell you use before you execute the mapman executable and then repeat the steps
|
